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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901274.1_cds_XP_016451300.1_45671
CDS Infomation

[gene=LOC107776004] [db_xref=GeneID:107776004] [protein=asparagine--tRNA ligase, chloroplastic/mitochondrial-like] [protein_id=XP_016451300.1] [location=complement(join(106089..106204,106470..106596,108931..109005,109087..109182,109282..109368,109482..109565,109660..109734,109852..109920,110070..110147,111797..111877,112347..112484,113579..113683,114074..114184,115687..115755,115865..116266))] [gbkey=CDS]
Sequence

ATGGCTGGTGCTCTGTCTCCAGCCACCACTCTCCGCCTTAAACCCTTCTGCACCGTACGG
TTCTTCACTCATTATCGCAAACCCATTAAACTCTTAACCCCCAATTACTACTCATCCTTT
CCTCTAAAGCTACGCACCATCTCAATTCCAGCACCCTACCGTCGACGGAGCTTTTGCTCT
GTAGTCTCCGCCGCTATTTCCTCCGGAGAAGCAGTTGAAAAACCCAAATTTGAGCAAAAA
GATGGTGTAAAAACTGAGCAAGTTAGGGAATTTAAAAAAAGGTTGAGTATTGTTGACATA
AAAGGAGGGCCTGACGAAGGTTTGGGCCGCCTGGGGGAGACTTTGGTGGTTAGAGGTTGG
GTTCGCACGGTTAGGGCTCAGAGCAGCGTTACGTTTATTGATGTTAATGATGGTTCTTGT
CTTTCAAATATGCAATGTGTTATGGGCTCTGATGCTGAGGGTTATGATCAGGTAGACAAT
GGCTCAATTTCAACTGGTGCATCAGTATGGATAGAAGGTACTGTGGTCGGCAGTCAAGGA
TCAAAGCAGAAAATAGAGTTGAAGGTTCAGAAGCTTGTAGTGGTTGGTAAAAGCGATCCT
TCTTTCCCTATCCAGAAGAAAAGGGTCAGCAGAGAATTTTTGAGGACGAAAGCTCACCTT
CGCCCTCGAACTAATACCTTTGGTGCGGTTTCAAGGGTGAGAAATGCTCTGGCCTATGCT
ACACACAAGTTTTTCCAAGAAAATGGCTTTGTTTGGGTCTCGAGTCCAATAATCACTGCT
TCTGACTGTGAAGGAGCTGGTGAGCAATTCCGTGTGACCACCTTGATTCCGACCACCAAA
GAAGGTGGAGATTCACCAGTTAATGCTATCCCTACTACTGAATCTGGTTCTGTCGACTGG
TCGCAAGACTTCTTTGGGAAACAAGCATTTTTAACAGTGTCTGGGCAACTCAATGGTGAA
ACATATGCTACTGCTCTCTCCGATATCTATACTTTTGGCCCCACATTTAGAGCAGAAAAT
TCCAACACTTCCAGACACTTAGCAGAATTTTGGATGATTGAACCAGAACTAGCTTTTGCG
GACTTGGATGATGACATGGCCTGTGCTACTGCCTATCTCCAGTATGTAGTGCAATATGTG
TTGGAGAATTGCAAAGAAGATATGGATTTTTTCAATACTTGGATTGAGAAAGGGATCATC
AATAGACTAAGTGATGTTGTTGAAAAGAACTTTGTGCAGTTGACGTACACTGACGCTGTT
GAGCTTCTATTAAAAGCAAAAAAGAAGTTCGATTTCCCGGTGAAATGGGGATGTGATTTG
CAAAGTGAGCATGAACGATATATCACCGAGGAGGCTTTTGGTGGATGCCCTATAATTATC
AGAGACTATCCGAAGGACATCAAAGCATTTTACATGCGACAGAATGATGATGGAAAGACT
GTTGCAGCCATGGATATGTTGGTACCTCGGGTCGGGGAACTTATTGGTGGAAGTCAAAGG
GAAGAACGCCTTGAATACCTAGAAGAACGCTTGGATAACTTGAATCTCAACAAAGAAAGC
TTTTGGTGGTATCTTGATCTGCGTCGTTATGGTTCAGTTCCTCATGCTGGATTTGGATTA
GGCTTCGAAAGACTTGTGCAATTTGCGACTGGAATAGACAACATAAGAGATGCAATACCT
TTTCCTCGGACACCCGGCTCTGCTGAATTTTGA

Peptide Sequence

PEP ID

XP_016451300.1
PEP Infomation

PREDICTED: asparagine--tRNA ligase, chloroplastic/mitochondrial-like [Nicotiana tabacum]
Sequence

MAGALSPATTLRLKPFCTVRFFTHYRKPIKLLTPNYYSSFPLKLRTISIPAPYRRRSFCS
VVSAAISSGEAVEKPKFEQKDGVKTEQVREFKKRLSIVDIKGGPDEGLGRLGETLVVRGW
VRTVRAQSSVTFIDVNDGSCLSNMQCVMGSDAEGYDQVDNGSISTGASVWIEGTVVGSQG
SKQKIELKVQKLVVVGKSDPSFPIQKKRVSREFLRTKAHLRPRTNTFGAVSRVRNALAYA
THKFFQENGFVWVSSPIITASDCEGAGEQFRVTTLIPTTKEGGDSPVNAIPTTESGSVDW
SQDFFGKQAFLTVSGQLNGETYATALSDIYTFGPTFRAENSNTSRHLAEFWMIEPELAFA
DLDDDMACATAYLQYVVQYVLENCKEDMDFFNTWIEKGIINRLSDVVEKNFVQLTYTDAV
ELLLKAKKKFDFPVKWGCDLQSEHERYITEEAFGGCPIIIRDYPKDIKAFYMRQNDDGKT
VAAMDMLVPRVGELIGGSQREERLEYLEERLDNLNLNKESFWWYLDLRRYGSVPHAGFGL
GFERLVQFATGIDNIRDAIPFPRTPGSAEF

Transcript Sequence

Gene sequence data has not been registered.